STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxa-145F-box domain-containing protein. (362 aa)    
Predicted Functional Partners:
btb-19
BTB domain-containing protein.
   
    0.507
C50F4.12
Uncharacterized protein.
   
    0.502
cup-15
Coelomocyte uptake defective protein 15; Modulates the transport of substances from the endosomal to lysosomal compartments. Plays a role in lysosome formation and function in coelomocytes.
   
    0.463
T28A8.4
Uncharacterized protein.
   
    0.455
egrh-2
EGR (Early Growth factor Response factor) Homolog.
   
    0.428
btb-20
BTB domain-containing protein.
   
    0.426
bath-5
BTB and MATH domain containing.
   
    0.422
ZK287.7
Uncharacterized protein.
   
    0.412
T28A8.6
Uncharacterized protein.
   
    0.402
rad-54
Uncharacterized protein.
   
    0.400
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.