Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C52B11.5 | chc-1 | C52B11.5.1 | T20G5.1.1 | Uncharacterized protein. | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | 0.464 |
C52B11.5 | rabn-5 | C52B11.5.1 | F01F1.4.2 | Uncharacterized protein. | FYVE-type domain-containing protein. | 0.615 |
C52B11.5 | rabs-5 | C52B11.5.1 | Y42H9AR.3b.1 | Uncharacterized protein. | FYVE-type domain-containing protein. | 0.895 |
C52B11.5 | rme-6 | C52B11.5.1 | F49E7.1a.1 | Uncharacterized protein. | Receptor-mediated endocytosis protein 6; Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in endocytosis. Acts by regulating the activation of rab-5 by exchanging bound GDP for free GTP at clathrin coated pits. | 0.734 |
C52B11.5 | tbc-2 | C52B11.5.1 | ZK1248.10.2 | Uncharacterized protein. | TBC (Tre-2/Bub2/Cdc16) domain family. | 0.423 |
chc-1 | C52B11.5 | T20G5.1.1 | C52B11.5.1 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | Uncharacterized protein. | 0.464 |
chc-1 | rab-5 | T20G5.1.1 | F26H9.6.1 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | RAB family. | 0.896 |
chc-1 | rabs-5 | T20G5.1.1 | Y42H9AR.3b.1 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | FYVE-type domain-containing protein. | 0.425 |
chc-1 | rme-4 | T20G5.1.1 | F46F6.1a.2 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | UDENN domain-containing protein. | 0.497 |
chc-1 | rme-6 | T20G5.1.1 | F49E7.1a.1 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | Receptor-mediated endocytosis protein 6; Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in endocytosis. Acts by regulating the activation of rab-5 by exchanging bound GDP for free GTP at clathrin coated pits. | 0.756 |
chc-1 | rme-8 | T20G5.1.1 | F18C12.2a.1 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | J domain-containing protein. | 0.424 |
chc-1 | vps-29 | T20G5.1.1 | ZK1128.8b.1 | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. | 0.530 |
eif-2Bbeta | rme-6 | Y47H9C.7.1 | F49E7.1a.1 | Eukaryotic Initiation Factor; Belongs to the eIF-2B alpha/beta/delta subunits family. | Receptor-mediated endocytosis protein 6; Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in endocytosis. Acts by regulating the activation of rab-5 by exchanging bound GDP for free GTP at clathrin coated pits. | 0.718 |
rab-5 | chc-1 | F26H9.6.1 | T20G5.1.1 | RAB family. | Probable clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). May play a role in yolk protein clatherin-mediated endocytosis by oocytes during oogenesis ; Belongs to the clathrin heavy chain family. | 0.896 |
rab-5 | rabn-5 | F26H9.6.1 | F01F1.4.2 | RAB family. | FYVE-type domain-containing protein. | 0.957 |
rab-5 | rabs-5 | F26H9.6.1 | Y42H9AR.3b.1 | RAB family. | FYVE-type domain-containing protein. | 0.995 |
rab-5 | rme-4 | F26H9.6.1 | F46F6.1a.2 | RAB family. | UDENN domain-containing protein. | 0.540 |
rab-5 | rme-6 | F26H9.6.1 | F49E7.1a.1 | RAB family. | Receptor-mediated endocytosis protein 6; Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in endocytosis. Acts by regulating the activation of rab-5 by exchanging bound GDP for free GTP at clathrin coated pits. | 0.965 |
rab-5 | rme-8 | F26H9.6.1 | F18C12.2a.1 | RAB family. | J domain-containing protein. | 0.777 |
rab-5 | tbc-2 | F26H9.6.1 | ZK1248.10.2 | RAB family. | TBC (Tre-2/Bub2/Cdc16) domain family. | 0.881 |
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