STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F52D10.2PID domain-containing protein. (329 aa)    
Predicted Functional Partners:
F52E4.5
Uncharacterized protein.
      
 0.893
C06E7.4
Uncharacterized protein.
      
 0.881
F47G4.4
Uncharacterized protein.
      
 0.814
tpra-1
Transmembrane protein adipocyte-associated 1 homolog; Belongs to the UPF0359 family.
      
 0.810
E03H4.8
Coatomer_WDAD domain-containing protein.
      
 0.806
icmt-1
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.741
inx-20
Innexin; Structural component of the gap junctions. Belongs to the pannexin family.
      
 0.698
inx-11
Innexin-11; Structural component of the gap junctions. Belongs to the pannexin family.
   
  
 0.695
pax-1
Paired domain-containing protein.
      
 0.660
F10D7.5
NHR domain-containing protein.
   
  
 0.556
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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