STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oac-31NRF domain-containing protein. (705 aa)    
Predicted Functional Partners:
chil-25
Glyco_18 domain-containing protein.
      
 0.697
oac-29
Acyl_transf_3 domain-containing protein.
      
 0.666
C23G10.11
Uncharacterized protein.
      
 0.662
nspd-3
Nematode Specific Peptide family, group D.
      
 0.660
ugt-19
UDP-GlucuronosylTransferase.
   
  
 0.615
oac-30
Acyl_transf_3 domain-containing protein.
      
 0.589
plr-1
Probable E3 ubiquitin-protein ligase plr-1; Probable E3 ubiquitin-protein ligase that acts as a negative regulator of the Wnt signaling pathway by mediating the ubiquitination, endocytosis and subsequent degradation of Wnt receptor complex components Frizzled (By similarity). Acts on both canonical and non- canonical Wnt signaling pathway (By similarity). Plays a role in the migration and axon guidance of different neuronal cell types including CAN, HSN, AVK and AVG. Promotes the differentiation and regulates the anteroposterior polarity of AVG unpaired interneurons by sequestering the [...]
      
 0.589
F53A9.1
Uncharacterized protein.
   
  
 0.556
F07A11.4
Ubiquitin carboxyl-terminal hydrolase.
      
 0.550
col-71
Col_cuticle_N domain-containing protein.
      
 0.536
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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