STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F54D1.1Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
pes-4
Patterned Expression Site.
   
 
 0.864
fubl-4
FUBp (FUBP) Like.
   
 
 0.850
T10E9.14
Uncharacterized protein.
      
 0.850
mask-1
Ankyrin repeat and KH domain-containing protein mask-1; Belongs to the mask family.
    
 
 0.823
mxt-1
Eukaryotic translation initiation factor 4E-binding protein Mextli homolog; Plays a role in promoting translation.
      
 0.758
C41G7.3
Messenger RNA-binding inhibitor of apoptosis 1; RNA-binding protein which binds to its own mRNA and target mRNAs to negatively regulate gene expression to modulate apoptosis and differentiation in the germline. Negatively regulates the expression of the argonaute protein wago-4, and may thus play a role in RNA-mediated gene silencing (RNAi) in the germline.
      
 0.741
tofu-7
Twenty One u-rna (21U-RNA) biogenesis Fouled Up.
      
 0.741
C05C12.5
Uncharacterized protein.
   
    0.615
comp-1
Protein kinase domain-containing protein.
   
    0.615
C17H12.5
Uncharacterized protein.
   
    0.592
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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