Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aat-7 | atgp-1 | F54D12.3.1 | F26D10.9a.1 | Amino Acid Transporter. | Aamy domain-containing protein. | 0.458 |
aat-7 | atgp-2 | F54D12.3.1 | C38C6.2a.1 | Amino Acid Transporter. | Aamy domain-containing protein. | 0.458 |
aat-7 | glt-4 | F54D12.3.1 | T22E5.2.1 | Amino Acid Transporter. | Putative sodium-dependent excitatory amino acid transporter glt-4; Sodium-dependent, high-affinity amino acid transporter that mediates the uptake of L-glutamate and also L-aspartate and D- aspartate. Functions as a symporter that transports one amino acid molecule together with two or three Na(+) ions and one proton, in parallel with the counter-transport of one K(+) ion. Mediates Cl(-) flux that is not coupled to amino acid transport; this avoids the accumulation of negative charges due to aspartate and Na(+) symport. | 0.586 |
aat-7 | swip-10 | F54D12.3.1 | F53B1.6.1 | Amino Acid Transporter. | Lactamase_B domain-containing protein. | 0.741 |
aat-7 | vglu-3 | F54D12.3.1 | T07A5.3.1 | Amino Acid Transporter. | Potential vesicular glutamate transporter vglu-3. | 0.777 |
atgp-1 | aat-7 | F26D10.9a.1 | F54D12.3.1 | Aamy domain-containing protein. | Amino Acid Transporter. | 0.458 |
atgp-2 | aat-7 | C38C6.2a.1 | F54D12.3.1 | Aamy domain-containing protein. | Amino Acid Transporter. | 0.458 |
glt-4 | aat-7 | T22E5.2.1 | F54D12.3.1 | Putative sodium-dependent excitatory amino acid transporter glt-4; Sodium-dependent, high-affinity amino acid transporter that mediates the uptake of L-glutamate and also L-aspartate and D- aspartate. Functions as a symporter that transports one amino acid molecule together with two or three Na(+) ions and one proton, in parallel with the counter-transport of one K(+) ion. Mediates Cl(-) flux that is not coupled to amino acid transport; this avoids the accumulation of negative charges due to aspartate and Na(+) symport. | Amino Acid Transporter. | 0.586 |
swip-10 | aat-7 | F53B1.6.1 | F54D12.3.1 | Lactamase_B domain-containing protein. | Amino Acid Transporter. | 0.741 |
swip-10 | vglu-3 | F53B1.6.1 | T07A5.3.1 | Lactamase_B domain-containing protein. | Potential vesicular glutamate transporter vglu-3. | 0.699 |
vglu-3 | aat-7 | T07A5.3.1 | F54D12.3.1 | Potential vesicular glutamate transporter vglu-3. | Amino Acid Transporter. | 0.777 |
vglu-3 | swip-10 | T07A5.3.1 | F53B1.6.1 | Potential vesicular glutamate transporter vglu-3. | Lactamase_B domain-containing protein. | 0.699 |