STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F54D5.7Probable glutaryl-CoA dehydrogenase, mitochondrial. (409 aa)    
Predicted Functional Partners:
ech-6
Probable enoyl-CoA hydratase, mitochondrial.
  
 0.973
ech-7
Enoyl-CoA Hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.971
ech-1.1
Enoyl-CoA Hydratase.
  
 0.970
ech-1.2
Enoyl-CoA Hydratase.
  
 0.970
dld-1
Dihydrolipoyl dehydrogenase, mitochondrial.
  
 
 0.964
dlst-1
Lipoyl-binding domain-containing protein.
  
 0.964
acox-1.6
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.940
ogdh-2
Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
  
 
 0.929
acdh-8
Acyl CoA DeHydrogenase.
   
 
0.920
acdh-10
Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial; This enzyme is specific for acyl chain lengths of 4 to 16. Belongs to the acyl-CoA dehydrogenase family.
   
 
0.920
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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