STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F55F8.7Protein-tyrosine-phosphatase. (491 aa)    
Predicted Functional Partners:
F47B3.1
Tyrosine-protein phosphatase.
  
 
0.689
ZK484.7
Tyrosine-protein phosphatase.
  
 
0.682
C17H12.3
Tyrosine-protein phosphatase.
  
 
0.680
T22C1.8
Tyrosine-protein phosphatase.
  
   
0.646
C18H7.4
Tyrosine-protein kinase.
   
   0.638
kin-26
Tyrosine-protein kinase.
   
   0.638
kin-5
Tyrosine-protein kinase.
   
   0.635
T27A3.5
Tyrosine-protein phosphatase.
  
   
0.629
C34F11.5
Tyrosine-protein kinase.
   
   0.626
spe-8
Spermatocyte protein spe-8; Probable non-receptor tyrosine-protein kinase which plays a role in spermatid activation (spermiogenesis) in hermaphrodites.
   
   0.626
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.