STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sre-30Serpentine receptor class epsilon-30. (357 aa)    
Predicted Functional Partners:
sru-37
Serpentine Receptor, class U.
   
    0.457
irld-29
Recep_L_domain domain-containing protein.
   
    0.456
srbc-38
Serpentine Receptor, class BC (Class B-like).
   
    0.445
str-158
Seven TM Receptor.
   
    0.426
C16D9.8
Uncharacterized protein.
   
    0.412
fbxb-55
F-box B protein.
   
    0.410
sru-4
Serpentine Receptor, class U.
   
    0.405
srx-74
Serpentine Receptor, class X.
   
    0.404
K09C4.9
Uncharacterized protein.
   
    0.404
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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