Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cfi-1 | fax-1 | T23D8.8.1 | F56E3.4a.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | Nuclear receptor domain-containing protein. | 0.670 |
| cfi-1 | nmr-1 | T23D8.8.1 | F07F6.6.2 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | 0.467 |
| cfi-1 | unc-3 | T23D8.8.1 | Y16B4A.1.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | Transcription factor unc-3; May play a role in the expression of proteins essential for axonal pathfinding and/or neuronal differentiation in both sensory and motor neurons. Cooperates with jmjd-3.1 and wdr-5.1 to ensure robust transdifferentiation of the Y rectal cell to the PDA motor neuron during larval development. | 0.817 |
| cfi-1 | unc-42 | T23D8.8.1 | F58E6.10b.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | Homeobox domain-containing protein. | 0.743 |
| cfi-1 | unc-86 | T23D8.8.1 | C30A5.7b.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | Transcription factor unc-86; Transcription factor required for correct cell fate determination and differentiation in diverse neuronal cell lineages where it plays a role in specifying the fate of daughter cells during cell divisions. Involved in sensory neuron production and function. Binds both alone and with mec-3 to the mec-3 promoter to initiate and maintain mec-3 expression which is required for sensory neuron differentiation. In addition, binds both alone and with mec-3 to the promoters of mec-4 and mec-7 which act to regulate sensory neuron function. Involved in determining the [...] | 0.753 |
| dpy-11 | unc-42 | F46E10.9.2 | F58E6.10b.1 | Thioredoxin domain-containing protein. | Homeobox domain-containing protein. | 0.721 |
| fax-1 | cfi-1 | F56E3.4a.1 | T23D8.8.1 | Nuclear receptor domain-containing protein. | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | 0.670 |
| fax-1 | hlh-34 | F56E3.4a.1 | T01D3.2.1 | Nuclear receptor domain-containing protein. | Helix-loop-helix 34; Transcription factor that may be a master gene of CNS development in cooperation with Arnt. It may have pleiotropic effects in the tissues expressed during development (By similarity). | 0.581 |
| fax-1 | nmr-1 | F56E3.4a.1 | F07F6.6.2 | Nuclear receptor domain-containing protein. | NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | 0.740 |
| fax-1 | nmr-2 | F56E3.4a.1 | T01C3.10a.1 | Nuclear receptor domain-containing protein. | NMDA-type ionotropic glutamate receptor NMR-2. | 0.702 |
| fax-1 | pept-3 | F56E3.4a.1 | F56F4.5.1 | Nuclear receptor domain-containing protein. | Peptide transporter 3; Neuron-specific, H(+)-coupled oligopeptide transporter with broad specificity towards di- and tripeptides in a Na(+) and Cl(-)- independent manner. Shows H(+) channel activity in the absence of peptide substrates; Belongs to the PTR2/POT transporter (TC 2.A.17) family. | 0.705 |
| fax-1 | unc-3 | F56E3.4a.1 | Y16B4A.1.1 | Nuclear receptor domain-containing protein. | Transcription factor unc-3; May play a role in the expression of proteins essential for axonal pathfinding and/or neuronal differentiation in both sensory and motor neurons. Cooperates with jmjd-3.1 and wdr-5.1 to ensure robust transdifferentiation of the Y rectal cell to the PDA motor neuron during larval development. | 0.578 |
| fax-1 | unc-42 | F56E3.4a.1 | F58E6.10b.1 | Nuclear receptor domain-containing protein. | Homeobox domain-containing protein. | 0.763 |
| fax-1 | unc-86 | F56E3.4a.1 | C30A5.7b.1 | Nuclear receptor domain-containing protein. | Transcription factor unc-86; Transcription factor required for correct cell fate determination and differentiation in diverse neuronal cell lineages where it plays a role in specifying the fate of daughter cells during cell divisions. Involved in sensory neuron production and function. Binds both alone and with mec-3 to the mec-3 promoter to initiate and maintain mec-3 expression which is required for sensory neuron differentiation. In addition, binds both alone and with mec-3 to the promoters of mec-4 and mec-7 which act to regulate sensory neuron function. Involved in determining the [...] | 0.586 |
| hlh-34 | fax-1 | T01D3.2.1 | F56E3.4a.1 | Helix-loop-helix 34; Transcription factor that may be a master gene of CNS development in cooperation with Arnt. It may have pleiotropic effects in the tissues expressed during development (By similarity). | Nuclear receptor domain-containing protein. | 0.581 |
| hlh-34 | unc-42 | T01D3.2.1 | F58E6.10b.1 | Helix-loop-helix 34; Transcription factor that may be a master gene of CNS development in cooperation with Arnt. It may have pleiotropic effects in the tissues expressed during development (By similarity). | Homeobox domain-containing protein. | 0.693 |
| nmr-1 | cfi-1 | F07F6.6.2 | T23D8.8.1 | NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | 0.467 |
| nmr-1 | fax-1 | F07F6.6.2 | F56E3.4a.1 | NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | Nuclear receptor domain-containing protein. | 0.740 |
| nmr-1 | nmr-2 | F07F6.6.2 | T01C3.10a.1 | NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | NMDA-type ionotropic glutamate receptor NMR-2. | 0.999 |
| nmr-1 | pept-3 | F07F6.6.2 | F56F4.5.1 | NMDA-type ionotropic glutamate receptor NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. | Peptide transporter 3; Neuron-specific, H(+)-coupled oligopeptide transporter with broad specificity towards di- and tripeptides in a Na(+) and Cl(-)- independent manner. Shows H(+) channel activity in the absence of peptide substrates; Belongs to the PTR2/POT transporter (TC 2.A.17) family. | 0.702 |
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