STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H43E16.1Uncharacterized protein. (1203 aa)    
Predicted Functional Partners:
H02F09.3
Uncharacterized protein.
   
  
 0.861
H02F09.2
Uncharacterized protein.
   
  
 0.850
C25H3.10
F-box domain-containing protein.
      
 0.848
F09F7.6
Uncharacterized protein.
      
 0.809
mpk-2
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
 0.732
aqp-1
AQuaPorin or aquaglyceroporin related; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.722
far-7
Fatty Acid/Retinol binding protein.
   
  
 0.704
Y54G2A.37
C-type lectin domain-containing protein.
   
 
 0.668
asm-3
Putative sphingomyelin phosphodiesterase asm-3; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family.
      
 0.660
fbxa-157
F-box domain-containing protein.
   
  
 0.623
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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