STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mps-2MiRP K channel accessory Subunit. (164 aa)    
Predicted Functional Partners:
suco-1
SUN domain-containing protein.
      
 0.854
kvs-3
Uncharacterized protein; Belongs to the potassium channel family.
      
 0.850
K01A2.9
annotation not available
   
   
0.846
mps-4
MinK-related peptide, potassium channel accessory subunit protein 4.
      
 0.809
mps-1
MiRP K channel accessory Subunit.
      
 0.722
unc-84
Nuclear migration and anchoring protein unc-84; Involved in nuclear migration and anchoring in hypodermal precursor cells. Most likely recruits anc-1 to the nuclear envelope where anc-1 functions to tether the nucleus to the actin cytoskeleton. Component of the unc-83-unc-84 LINC (LInker of Nucleoskeleton and Cytoskeleton) complex where it recruits and interacts with unc-83 to form a bridge connecting the nuclear envelope to the cytoskeleton which allows for nuclear transport along microtubules. Its role in nuclear migration may be in association with lamin, lmn-1. Regulates nuclear mi [...]
      
 0.699
sec-20
Yeast SEC homolog; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
      
 0.675
pus-1
PseudoU_synth_1 domain-containing protein.
      
 0.660
kvs-4
Probable voltage-gated potassium channel subunit kvs-4; Voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes.
      
 0.660
B0454.6
AA_permease_C domain-containing protein.
      
 0.620
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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