STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-172C-type lectin domain-containing protein. (170 aa)    
Predicted Functional Partners:
R08F11.7
Uncharacterized protein.
      
 0.804
C39B5.14
Lipase_3 domain-containing protein.
    
 
 0.741
lys-5
Lysozyme-like protein 5; Plays a role in resistance to Gram-positive bacteria S.aureus or B.thuringiensis infection.
      
 0.741
Y46H3A.5
Lipase_3 domain-containing protein.
    
 
 0.741
clec-204
C-type LECtin.
   
  
 0.707
clec-52
C-type LECtin.
   
  
 0.705
K08C7.4
Uncharacterized protein.
      
 0.700
drd-1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.698
Y73B6BL.37
Lipase_GDSL domain-containing protein.
    
 
 0.686
spp-2
Saposin B-type domain-containing protein.
   
  
 0.684
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.