STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-88C-type lectin domain-containing protein 88. (243 aa)    
Predicted Functional Partners:
C01G8.1
Uncharacterized protein.
   
    0.999
C05C10.5
Uncharacterized protein C05C10.5.
   
   0.999
clec-87
C-type lectin domain-containing protein 87.
   
  
0.999
gln-6
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
   
    0.999
EEED8.3
Uncharacterized protein EEED8.3; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
    0.999
F18A1.7
CPG4 domain-containing protein.
   
    0.999
pos-1
Cytoplasmic zinc-finger protein.
   
    0.999
T21C9.13
Uncharacterized protein.
   
    0.999
T22D1.5
Uncharacterized protein.
   
    0.999
gna-2
Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily.
   
  
 0.999
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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