STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K10D6.2Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
Y55D5A.1
Uncharacterized protein.
   
  
 0.833
C35E7.11
Uncharacterized protein.
   
  
 0.820
F10G2.1
UPF0376 protein F10G2.1.
      
 0.810
K10G6.4
Uncharacterized protein.
   
  
 0.712
del-6
DEgenerin Like; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.692
Y44A6D.2
Uncharacterized protein.
   
  
 0.562
clc-1
CLaudin-like in Caenorhabditis.
      
 0.549
vab-9
Cell junction protein VAB-9.
   
  
 0.482
grd-10
Ground-like domain-containing protein.
   
  
 0.477
coq-2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate; Belongs to the UbiA prenyltransferase family.
      
 0.470
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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