STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps-27Ig-like domain-containing protein. (424 aa)    
Predicted Functional Partners:
dap-3
Mammalian cell Death Associated Protein related.
   
 0.993
mrps-15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 0.993
mrpl-10
Mitochondrial Ribosomal Protein, Large.
   
 
 0.990
mrpl-38
Mitochondrial Ribosomal Protein, Large.
   
 
 0.990
mrps-30
Mitochondrial Ribosomal Protein, Small.
   
 0.988
mrps-5
Putative 28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 0.988
let-630
Uncharacterized protein.
   
 0.988
mrps-22
Mitochondrial Ribosomal Protein, Small.
   
 0.987
mrps-2
Mitochondrial Ribosomal Protein, Small.
   
 0.986
mrps-9
Probable 40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 0.984
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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