M03A8.3 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M03A8.3

Uncharacterized protein. (374 aa)

Predicted Functional Partners:

F20G2.3

0.916

srsx-9

0.916

F28H7.8

0.916

C44C10.3

0.810

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C44C10.3	F20G2.3	C44C10.3.1	F20G2.3a.1	MFS domain-containing protein.	CRAL-TRIO domain-containing protein.	0.807
C44C10.3	F28H7.8	C44C10.3.1	F28H7.8.1	MFS domain-containing protein.	CRAL-TRIO domain-containing protein F28H7.8.	0.807
C44C10.3	M03A8.3	C44C10.3.1	M03A8.3.1	MFS domain-containing protein.	Uncharacterized protein.	0.810
C44C10.3	srsx-9	C44C10.3.1	F26G5.10.1	MFS domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.952
F20G2.3	C44C10.3	F20G2.3a.1	C44C10.3.1	CRAL-TRIO domain-containing protein.	MFS domain-containing protein.	0.807
F20G2.3	M03A8.3	F20G2.3a.1	M03A8.3.1	CRAL-TRIO domain-containing protein.	Uncharacterized protein.	0.916
F20G2.3	srsx-9	F20G2.3a.1	F26G5.10.1	CRAL-TRIO domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.913
F28H7.8	C44C10.3	F28H7.8.1	C44C10.3.1	CRAL-TRIO domain-containing protein F28H7.8.	MFS domain-containing protein.	0.807
F28H7.8	M03A8.3	F28H7.8.1	M03A8.3.1	CRAL-TRIO domain-containing protein F28H7.8.	Uncharacterized protein.	0.916
F28H7.8	srsx-9	F28H7.8.1	F26G5.10.1	CRAL-TRIO domain-containing protein F28H7.8.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.913
M03A8.3	C44C10.3	M03A8.3.1	C44C10.3.1	Uncharacterized protein.	MFS domain-containing protein.	0.810
M03A8.3	F20G2.3	M03A8.3.1	F20G2.3a.1	Uncharacterized protein.	CRAL-TRIO domain-containing protein.	0.916
M03A8.3	F28H7.8	M03A8.3.1	F28H7.8.1	Uncharacterized protein.	CRAL-TRIO domain-containing protein F28H7.8.	0.916
M03A8.3	srsx-9	M03A8.3.1	F26G5.10.1	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.916
srsx-9	C44C10.3	F26G5.10.1	C44C10.3.1	G_PROTEIN_RECEP_F1_2 domain-containing protein.	MFS domain-containing protein.	0.952
srsx-9	F20G2.3	F26G5.10.1	F20G2.3a.1	G_PROTEIN_RECEP_F1_2 domain-containing protein.	CRAL-TRIO domain-containing protein.	0.913
srsx-9	F28H7.8	F26G5.10.1	F28H7.8.1	G_PROTEIN_RECEP_F1_2 domain-containing protein.	CRAL-TRIO domain-containing protein F28H7.8.	0.913
srsx-9	M03A8.3	F26G5.10.1	M03A8.3.1	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.916