STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M04C3.2SNF2_N domain-containing protein. (587 aa)    
Predicted Functional Partners:
nhr-115
Nuclear hormone receptor family member nhr-115; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
   
 
 0.821
fbxa-60
F-box domain-containing protein.
   
  
 0.768
T25D10.1
Uncharacterized protein T25D10.1.
  
 
 0.766
fbxa-30
F-box domain-containing protein.
   
  
 0.758
Y46D2A.2
Uncharacterized protein.
   
  
 0.752
Y51B9A.8
ShKT domain-containing protein.
      
 0.740
F52G3.4
annotation not available
  
 
 0.732
F59H6.5
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.732
Y46B2A.2
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.732
F33H12.6
ATP-dependent DNA helicase; Belongs to the helicase family.
  
 
 0.729
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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