STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cah-4Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (280 aa)    
Predicted Functional Partners:
bca-2
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.831
bca-1
Beta carbonic anhydrase 1; Reversible hydration of carbon dioxide; Belongs to the beta-class carbonic anhydrase family.
  
  
 0.739
Y54E10A.10
Ribosome production factor 2 homolog.
   
 
 0.709
lips-15
LIPaSe related.
   
  
 0.704
nspe-2
Nematode Specific Peptide family, group E.
   
  
 0.702
F35E8.10
Uncharacterized protein.
      
 0.698
F35E8.13
annotation not available
      
 0.698
ZK180.5
Uncharacterized protein.
   
  
 0.672
T15D6.8
Methyltransf_21 domain-containing protein.
   
  
 0.670
C55B7.11
Uncharacterized protein.
      
 0.667
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.