STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srt-18Serpentine Receptor, class T. (337 aa)    
Predicted Functional Partners:
srv-12
Serpentine Receptor, class V.
   
  
 0.916
srsx-33
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.914
srsx-32
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.913
srsx-26
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.912
srv-11
Serpentine Receptor, class V.
   
  
 0.908
srsx-37
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.822
srg-37
Serpentine receptor class gamma; Belongs to the nematode receptor-like protein srg family.
      
 0.619
rpl-21
60S ribosomal protein L21; Belongs to the eukaryotic ribosomal protein eL21 family.
   
   0.550
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.536
rpl-16
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.469
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.