STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugt-47Putative UDP-glucuronosyltransferase ugt-47; Belongs to the UDP-glycosyltransferase family. (536 aa)    
Predicted Functional Partners:
slc-17.9
MFS domain-containing protein.
      
 0.808
Y19D10A.11
annotation not available
      
 0.808
F56A4.12
MFS domain-containing protein.
      
 0.759
gst-39
Glutathione S-Transferase.
      
 0.741
dhs-28
SCP2 domain-containing protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.703
dhs-5
Uncharacterized oxidoreductase dhs-5.
      
 0.693
gst-8
Probable glutathione S-transferase 8; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Belongs to the GST superfamily. Sigma family.
      
 0.691
gst-22
Glutathione S-Transferase.
   
  
 0.676
dhs-2
DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.675
gst-24
Glutathione S-Transferase.
      
 0.587
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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