STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhs-14DeHydrogenases, Short chain. (279 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.840
T21G5.1
Tyrosine-protein kinase.
    
 
 0.829
gska-3
Protein kinase domain-containing protein.
    
 
 0.828
wht-5
ABC transporter domain-containing protein.
   
 
 0.811
B0280.11
Putative tyrosine-protein phosphatase B0280.11.
   
  
 0.807
C50F4.6
Uncharacterized protein.
      
 0.807
T25B9.6
Uncharacterized protein.
      
 0.807
Y57G11C.6
Protein Tyrosine Phosphatase.
   
  
 0.807
ZC155.2
Histone domain-containing protein.
   
  
 0.804
C09B8.4
Uncharacterized protein.
   
  
 0.698
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.