STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lec-8Probable galaptin lec-8. (180 aa)    
Predicted Functional Partners:
F35C11.4
Uncharacterized protein.
   
  
 0.769
F57F4.4
Uncharacterized protein.
   
  
 0.741
nstp-10
GDP-fucose transporter; Involved in GDP-fucose import from the cytoplasm into the Golgi lumen; Belongs to the TPT transporter family. SLC35C subfamily.
      
 0.669
clec-79
C-type lectin domain-containing protein.
   
  
 0.667
nstp-5
Nucleotide Sugar TransPorter family.
    
 
 0.616
R01B10.4
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
      
 0.612
lec-9
Galectin.
  
  
0.569
F19C7.1
Uncharacterized protein.
   
    0.516
lec-6
Galectin.
  
  
0.516
samt-1
SAM (S-Adenosyl Methionine) Transporter.
   
  
 0.480
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.