STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R07E5.15Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
T23F11.2
Uncharacterized protein.
   
   
0.874
C39H7.1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.846
gsp-3
Serine/threonine-protein phosphatase PP1-gamma; Probable phosphatase which plays a redundant role with gsp-4 in spermatogenesis by regulating sister chromatid segregation during meiosis. In addition, involved in sperm motility by controlling the dynamic disassembly of major sperm proteins (MSP) in the spermatozoan pseudopodium.
   
    0.846
Y38H8A.3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.829
R10E9.2
Uncharacterized protein.
   
   
0.807
F32B6.4
Uncharacterized protein.
   
    0.796
gipc-2
PDZ domain-containing protein.
   
    0.774
K06A5.2
Uncharacterized protein.
   
    0.774
W02B12.12
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.753
Y69E1A.1
Uncharacterized protein.
   
    0.753
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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