Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F33D11.10 | T20G5.9 | F33D11.10.1 | T20G5.9.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Mago-bind domain-containing protein. | 0.614 |
| F33D11.10 | W08E3.2 | F33D11.10.1 | W08E3.2.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Btz domain-containing protein. | 0.994 |
| F33D11.10 | cfim-1 | F33D11.10.1 | F43G9.5.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.526 |
| F33D11.10 | hel-1 | F33D11.10.1 | C26D10.2a.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Spliceosome RNA helicase DDX39B homolog; Required for mRNA export out of the nucleus. May play a role in spliceosome assembly. | 0.938 |
| F33D11.10 | mag-1 | F33D11.10.1 | R09B3.5.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Protein mago nashi homolog; Involved in hermaphrodite germline sex determination. May allow oogenesis by inhibiting the function of one or more of the masculinizing genes (fog, fem, and gld) which act during the fourth larval stage to promote transient sperm production in the hermaphrodite germline; Belongs to the mago nashi family. | 0.995 |
| F33D11.10 | rnp-4 | F33D11.10.1 | R07E5.14.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.999 |
| F33D11.10 | rnp-5 | F33D11.10.1 | K02F3.11.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | RRM domain-containing protein. | 0.985 |
| F33D11.10 | rsp-6 | F33D11.10.1 | C33H5.12a.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Probable splicing factor, arginine/serine-rich 6; Plays a functionally redundant role in shifting germ cell sexual differentiation in hermaprodites. Required for the development of somatic gonad structures and for progression from larval stage to adulthood; Belongs to the splicing factor SR family. | 0.898 |
| F33D11.10 | smg-4 | F33D11.10.1 | F46B6.3b.1 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Smg4_UPF3 domain-containing protein. | 0.967 |
| T16G12.6 | mag-1 | T16G12.6.1 | R09B3.5.1 | Xpo1 domain-containing protein. | Protein mago nashi homolog; Involved in hermaphrodite germline sex determination. May allow oogenesis by inhibiting the function of one or more of the masculinizing genes (fog, fem, and gld) which act during the fourth larval stage to promote transient sperm production in the hermaphrodite germline; Belongs to the mago nashi family. | 0.904 |
| T16G12.6 | rnp-4 | T16G12.6.1 | R07E5.14.1 | Xpo1 domain-containing protein. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.908 |
| T20G5.9 | F33D11.10 | T20G5.9.1 | F33D11.10.1 | Mago-bind domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.614 |
| T20G5.9 | W08E3.2 | T20G5.9.1 | W08E3.2.1 | Mago-bind domain-containing protein. | Btz domain-containing protein. | 0.639 |
| T20G5.9 | mag-1 | T20G5.9.1 | R09B3.5.1 | Mago-bind domain-containing protein. | Protein mago nashi homolog; Involved in hermaphrodite germline sex determination. May allow oogenesis by inhibiting the function of one or more of the masculinizing genes (fog, fem, and gld) which act during the fourth larval stage to promote transient sperm production in the hermaphrodite germline; Belongs to the mago nashi family. | 0.995 |
| T20G5.9 | rnp-4 | T20G5.9.1 | R07E5.14.1 | Mago-bind domain-containing protein. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.999 |
| T20G5.9 | smg-4 | T20G5.9.1 | F46B6.3b.1 | Mago-bind domain-containing protein. | Smg4_UPF3 domain-containing protein. | 0.515 |
| W08E3.2 | F33D11.10 | W08E3.2.1 | F33D11.10.1 | Btz domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.994 |
| W08E3.2 | T20G5.9 | W08E3.2.1 | T20G5.9.1 | Btz domain-containing protein. | Mago-bind domain-containing protein. | 0.639 |
| W08E3.2 | cfim-1 | W08E3.2.1 | F43G9.5.1 | Btz domain-containing protein. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.499 |
| W08E3.2 | hel-1 | W08E3.2.1 | C26D10.2a.1 | Btz domain-containing protein. | Spliceosome RNA helicase DDX39B homolog; Required for mRNA export out of the nucleus. May play a role in spliceosome assembly. | 0.657 |
page 1 of 5