STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqn-54Prion-like-(Q/N-rich)-domain-bearing protein. (388 aa)    
Predicted Functional Partners:
abu-11
Activated in Blocked Unfolded protein response.
   
  
 0.871
R12E2.14
Uncharacterized protein.
   
  
 0.697
C46C2.5
Uncharacterized protein.
      
 0.668
C32F10.4
Uncharacterized protein.
      
 0.666
D1086.2
DUF19 domain-containing protein.
      
 0.666
C10C5.2
F-box C protein.
      
 0.661
Y58A7A.3
Uncharacterized protein.
      
 0.661
R12E2.15
Uncharacterized protein.
   
  
 0.629
pals-11
Protein containing ALS2cr12 (ALS2CR12) signature.
      
 0.618
abu-1
Activated in Blocked Unfolded protein response.
   
  
0.617
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.