STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acs-18AMP-binding domain-containing protein. (700 aa)    
Predicted Functional Partners:
acs-16
AMP-binding domain-containing protein.
  
 
 0.940
fasn-1
Carrier domain-containing protein.
   
 0.918
cpt-1
Carnitine Palmitoyl Transferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.909
W03F9.4
Carn_acyltransf domain-containing protein.
     
 0.906
ZK945.6
Uncharacterized protein ZK945.6.
   
    0.866
Y49F6B.8
Uncharacterized protein.
   
  
 0.852
ppt-1
Palmitoyl-protein thioesterase 1; Removes thioester-linked fatty acyl groups such as palmitate from modified cysteine residues in proteins or peptides.
   
 
 0.844
B0379.7
Uncharacterized protein.
   
    0.829
acdh-8
Acyl CoA DeHydrogenase.
  
 0.826
acs-15
Fatty Acid CoA Synthetase family.
  
 
0.814
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.