Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
W08E12.2 | W08E12.4 | W08E12.2.1 | W08E12.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
W08E12.2 | eor-1 | W08E12.2.1 | R11E3.6a.1 | Uncharacterized protein. | EOR-1. | 0.660 |
W08E12.4 | W08E12.2 | W08E12.4.1 | W08E12.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
W08E12.4 | eor-1 | W08E12.4.1 | R11E3.6a.1 | Uncharacterized protein. | EOR-1. | 0.660 |
abts-1 | eor-1 | F52B5.1c.1 | R11E3.6a.1 | Anion exchange protein. | EOR-1. | 0.666 |
abts-1 | eor-2 | F52B5.1c.1 | C44H4.7a.2 | Anion exchange protein. | EOR-2A. | 0.533 |
alr-1 | eor-1 | R08B4.2.1 | R11E3.6a.1 | Homeobox domain-containing protein. | EOR-1. | 0.685 |
eor-1 | W08E12.2 | R11E3.6a.1 | W08E12.2.1 | EOR-1. | Uncharacterized protein. | 0.660 |
eor-1 | W08E12.4 | R11E3.6a.1 | W08E12.4.1 | EOR-1. | Uncharacterized protein. | 0.660 |
eor-1 | abts-1 | R11E3.6a.1 | F52B5.1c.1 | EOR-1. | Anion exchange protein. | 0.666 |
eor-1 | alr-1 | R11E3.6a.1 | R08B4.2.1 | EOR-1. | Homeobox domain-containing protein. | 0.685 |
eor-1 | eor-2 | R11E3.6a.1 | C44H4.7a.2 | EOR-1. | EOR-2A. | 0.942 |
eor-1 | lin-1 | R11E3.6a.1 | C37F5.1a.1 | EOR-1. | ETS domain-containing protein. | 0.775 |
eor-1 | lin-25 | R11E3.6a.1 | F56H9.5.2 | EOR-1. | Protein lin-25; Participates in the inductive signaling pathway downstream of let-60 Ras and the RAF/MAP kinase cascade to regulate specification and differentiation of many cell types. Positively regulates the fate of vulval precursor cells. Required for induction of the P12 and excretory duct cell fates. In males, it is also required for proper formation of spicules. Does not function in the signaling pathway that promotes exit from pachytene. Plays a role in responses to M.nematophilum-mediated bacterial infection by promoting tail swelling and preventing constipation. | 0.800 |
eor-1 | lin-3 | R11E3.6a.1 | F36H1.4f.1 | EOR-1. | Protein lin-3; Probable ligand for tyrosine kinase receptor let-23. Essential for vulval induction, where it acts downstream of the synthetic multivulva (synMuv) class genes. Probably by activating let-23, phospholipase plc-3 and inositol 1,4,5-trisphosphate receptor itr-1 signaling cascade, plays a role in ovulation by promoting gonadal sheath cell contractions and spermatheca dilatation during ovulation. Probably by regulating neuronal transmission in ALA neurons, mediates the decrease in pharyngeal pumping and locomotion during the quiescent state that precedes each larval molt, by [...] | 0.620 |
eor-1 | sos-1 | R11E3.6a.1 | T28F12.3.1 | EOR-1. | Son of sevenless homolog; Promotes the exchange of Ras-bound GDP by GTP (By similarity). May regulate signaling pathways downstream of receptor tyrosine kinase, egl-15 and let-23. Required for larval and male spicule development, fluid homeostasis, vulva induction, spermatogenesis, and oogenesis by promoting meiosis prophase exit during oocyte maturation. Required for the delamination of G1 cell by promoting the loss of cell junctions and detachment from the excretory system during larval development. Plays a role in nicotinic acetylcholine receptor (nAChR)-mediated sensitivity to nico [...] | 0.635 |
eor-1 | sur-2 | R11E3.6a.1 | F39B2.4b.1 | EOR-1. | Mediator of RNA polymerase II transcription subunit 23; Component of the Mediator complex, a coactivator involved in regulated gene transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors (By similarity). Functi [...] | 0.698 |
eor-2 | abts-1 | C44H4.7a.2 | F52B5.1c.1 | EOR-2A. | Anion exchange protein. | 0.533 |
eor-2 | eor-1 | C44H4.7a.2 | R11E3.6a.1 | EOR-2A. | EOR-1. | 0.942 |
eor-2 | lin-1 | C44H4.7a.2 | C37F5.1a.1 | EOR-2A. | ETS domain-containing protein. | 0.699 |
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