STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R13D11.3Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
str-108
Seven TM Receptor.
   
    0.507
srx-32
7TM_GPCR_Srx domain-containing protein.
   
    0.502
srw-14
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.473
lgc-48
Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
    0.473
srbc-41
Serpentine Receptor, class BC (Class B-like).
   
    0.473
sre-26
Serpentine receptor class epsilon-26.
   
    0.461
sre-24
Serpentine Receptor, class E (Epsilon).
   
    0.445
Y38C9B.3
Uncharacterized protein.
   
    0.435
str-172
Seven TM Receptor.
   
    0.430
srv-27
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.430
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (6%) [HD]