STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oat-1Multispecific organic anion transporter. (526 aa)    
Predicted Functional Partners:
F19F10.12
Beta-Casp domain-containing protein.
   
 
 0.763
ZC376.6
INTegrator complex Subunit homolog.
   
 
 0.750
F10B5.8
INTegrator complex Subunit homolog.
    
 
 0.738
Y92H12A.4
INTegrator complex Subunit homolog.
   
 
 0.737
D1043.1
INTegrator complex Subunit homolog.
    
 
 0.736
inst-1
INTegrator complex Subunit homolog.
    
 
 0.730
W04A4.5
INTegrator complex Subunit homolog.
    
 
 0.730
phf-30
PHD-type domain-containing protein.
    
 
 0.729
R02D3.4
INTegrator complex Subunit homolog.
    
 
 0.718
gakh-1
Protein kinase domain-containing protein.
      
 0.699
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.