STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhr-84Nuclear Hormone Receptor family. (416 aa)    
Predicted Functional Partners:
unc-39
Homeobox protein unc-39; Probable transcription factor required for differentiation and migration of neuronal cells, such as RID and CAN neurons. Specifically, plays a role in the terminal differentiation of RID peptidergic neurons. Also required for CAN neuron axon guidance.
  
   0.560
npax-4
Paired domain-containing protein.
  
     0.533
F19F10.1
ETS domain-containing protein.
  
 
   0.528
daf-14
MH2 domain-containing protein.
  
   0.527
ets-7
ETS domain-containing protein.
  
 
   0.527
ets-8
ETS domain-containing protein.
  
 
   0.520
nhr-102
Nuclear Hormone Receptor family.
  
   
0.499
daf-8
Dwarfin sma.
  
 
   0.490
ceh-32
Homeobox protein ceh-32; Plays a role in head morphogenesis, expression is regulated by vab-3.
  
     0.488
npax-1
Paired domain-containing protein.
  
 
   0.486
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (26%) [HD]