STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06E4.9Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
T06E4.8
Uncharacterized protein.
   
   
0.641
F41E6.11
Uncharacterized protein.
   
    0.610
abu-1
Activated in Blocked Unfolded protein response.
   
    0.593
abu-11
Activated in Blocked Unfolded protein response.
   
    0.592
T06E4.10
Uncharacterized protein.
   
   
0.592
pqn-63
Prion-like-(Q/N-rich)-domain-bearing protein.
   
    0.592
T06E4.14
Uncharacterized protein.
   
   
0.578
abu-8
Activated in Blocked Unfolded protein response.
   
    0.525
D2096.6
Uncharacterized protein D2096.6.
   
    0.525
grd-6
Ground-like domain-containing protein.
   
    0.524
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.