STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jmjd-4JmjC domain-containing protein. (367 aa)    
Predicted Functional Partners:
R01H2.8
Uncharacterized protein.
      
 0.964
jmjd-5
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.914
T20D3.5
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.853
jmjd-1.1
JmjC domain-containing protein.
      
 0.833
T07C4.12
COMM domain-containing protein.
 
      0.785
jmjd-3.3
JmjC domain-containing protein.
      
 0.755
gcc-2
GRIP and coiled-coil domain-containing protein 2.
      
 0.748
jmjd-2
Lysine-specific demethylase 4; Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. Involved in the negative regulation of lifespan in a germline-dependent fashion.
      
 0.742
jmjd-3.2
JmjC domain-containing protein.
      
 0.728
tbx-43
T BoX family.
      
 0.693
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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