STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T08B2.12Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
sss-1
Sperm-Specific family, class S.
   
    0.764
msp-142
Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142.
   
    0.742
gipc-2
PDZ domain-containing protein.
   
    0.709
F27C1.1
Uncharacterized protein.
   
    0.641
C33F10.1
Uncharacterized protein.
   
    0.615
F58A6.9
Major Sperm Protein.
   
    0.612
F17E9.5
Uncharacterized protein.
   
    0.607
msp-63
Major sperm protein 63; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.605
msp-38
Major sperm protein 38; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.602
C04F12.7
Uncharacterized protein.
   
    0.601
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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