STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09B9.3Uncharacterized protein T09B9.3. (340 aa)    
Predicted Functional Partners:
C18H7.6
Uncharacterized protein.
   
  
 0.863
T28F3.5
Uncharacterized protein.
   
  
 0.812
C03H5.4
Phospholipase A(2).
   
  
 0.710
pus-1
PseudoU_synth_1 domain-containing protein.
  
  
 0.700
Y45G12B.3
L-2-hydroxyglutarate dehydrogenase, mitochondrial.
    
 0.633
T25G3.4
Probable glycerol-3-phosphate dehydrogenase, mitochondrial.
  
 0.630
Y50E8A.6
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.630
srab-24
Serpentine Receptor, class AB (Class A-like).
  
 
 0.580
ung-1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.572
srab-4
Serpentine Receptor, class AB (Class A-like).
   
  
 0.550
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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