STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hum-6Unconventional myosin heavy chain 6; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). (2098 aa)    
Predicted Functional Partners:
eps-8
SH3 domain-containing protein.
   
 
 0.824
tmc-2
Transmembrane channel-like protein 2; Probable ion channel; Belongs to the TMC family.
   
  
 0.796
act-5
ACTin.
   
 
 0.768
ccdc-47
CCDC (Human Coiled Coil Domain Containing) homolog.
      
 0.758
twf-2
TWinFilin actin binding protein homolog.
   
  
 0.748
unc-40
Unc-40 protein.
    
 
 0.718
cmd-1
Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
    
 
 0.679
T27C10.9
Uncharacterized protein.
    
 
 0.679
T28D6.6
OBG-type G domain-containing protein.
 
    
 0.669
pqn-59
Prion-like-(Q/N-rich)-domain-bearing protein.
      
 0.668
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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