STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bca-1Beta carbonic anhydrase 1; Reversible hydration of carbon dioxide; Belongs to the beta-class carbonic anhydrase family. (270 aa)    
Predicted Functional Partners:
cah-5
Putative carbonic anhydrase 5; Reversible hydration of carbon dioxide.
    
 0.986
cah-6
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
    
 0.986
cah-3
Putative carbonic anhydrase 3; Reversible hydration of carbon dioxide.
  
 
 0.978
mtp-18
Mitochondrial fission process protein 1; Involved in the mitochondrial division probably by regulating membrane fission. Loss-of-function leads to apoptosis (By similarity). Belongs to the MTFP1 family.
   
  
 0.971
cah-2
Putative carbonic anhydrase-like protein 2.
     
 0.870
tbcd-1
Tubulin-specific chaperone D; Tubulin-folding protein; involved in the first step of the tubulin folding pathway (By similarity). Plays a role in microtubule polymerization ; Belongs to the TBCD family.
  
  
 0.769
cah-4
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
  
 0.739
cpz-2
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
      
 0.698
gcy-29
Receptor-type guanylate cyclase gcy-29; Guanylate cyclase involved in the production of the second messenger cGMP (By similarity).
      
 0.693
T28F3.5
Uncharacterized protein.
  
 
 0.677
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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