Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C34B7.2 | T19C3.4 | C34B7.2.1 | T19C3.4.1 | SAC domain-containing protein. | Uncharacterized protein T19C3.4. | 0.560 |
C34B7.2 | stau-1 | C34B7.2.1 | F55A4.5.1 | SAC domain-containing protein. | STAUfen (DsRNA binding protein) homolog. | 0.551 |
T19C3.4 | C34B7.2 | T19C3.4.1 | C34B7.2.1 | Uncharacterized protein T19C3.4. | SAC domain-containing protein. | 0.560 |
T19C3.4 | atln-1 | T19C3.4.1 | Y54G2A.2a.1 | Uncharacterized protein T19C3.4. | GB1/RHD3-type G domain-containing protein. | 0.871 |
T19C3.4 | atln-2 | T19C3.4.1 | Y41E3.3a.1 | Uncharacterized protein T19C3.4. | GB1/RHD3-type G domain-containing protein. | 0.571 |
T19C3.4 | esyt-2 | T19C3.4.1 | T12A2.15a.1 | Uncharacterized protein T19C3.4. | C2 domain-containing protein. | 0.617 |
T19C3.4 | fem-2 | T19C3.4.1 | T19C3.8.2 | Uncharacterized protein T19C3.4. | Protein phosphatase fem-2; Dephosphorylates auto-phosphorylated Ca(2+)/calmodulin- dependent protein kinase unc-43/CAMKII in vitro. Involved in the regulation of sex determination. Together with fem-3, required for male sexual development by promoting the proteasomal-mediated degradation of tra-1, a transcription repressor of male-specific genes. Promotes apoptosis. Belongs to the PP2C family. | 0.544 |
T19C3.4 | lnp-1 | T19C3.4.1 | C05E11.1b.1 | Uncharacterized protein T19C3.4. | Endoplasmic reticulum junction formation protein lunapark-1; Plays a role in tubular endoplasmic reticulum network formation and maintenance (By similarity). May be involved in central nervous system development. Has a presynaptic role in neurotransmission. Likely to operate in synaptogenesis by regulating vesicular transport or localization. Required for correct localization of rab-3 and snb-1; Belongs to the lunapark family. | 0.899 |
T19C3.4 | ret-1 | T19C3.4.1 | W06A7.3f.1 | Uncharacterized protein T19C3.4. | Reticulon-like protein. | 0.829 |
T19C3.4 | spas-1 | T19C3.4.1 | C24B5.2c.1 | Uncharacterized protein T19C3.4. | Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily. | 0.667 |
T19C3.4 | stau-1 | T19C3.4.1 | F55A4.5.1 | Uncharacterized protein T19C3.4. | STAUfen (DsRNA binding protein) homolog. | 0.548 |
T19C3.4 | tbc-12 | T19C3.4.1 | R11B5.1.1 | Uncharacterized protein T19C3.4. | Rab-GAP TBC domain-containing protein. | 0.547 |
atln-1 | T19C3.4 | Y54G2A.2a.1 | T19C3.4.1 | GB1/RHD3-type G domain-containing protein. | Uncharacterized protein T19C3.4. | 0.871 |
atln-1 | lnp-1 | Y54G2A.2a.1 | C05E11.1b.1 | GB1/RHD3-type G domain-containing protein. | Endoplasmic reticulum junction formation protein lunapark-1; Plays a role in tubular endoplasmic reticulum network formation and maintenance (By similarity). May be involved in central nervous system development. Has a presynaptic role in neurotransmission. Likely to operate in synaptogenesis by regulating vesicular transport or localization. Required for correct localization of rab-3 and snb-1; Belongs to the lunapark family. | 0.706 |
atln-1 | ret-1 | Y54G2A.2a.1 | W06A7.3f.1 | GB1/RHD3-type G domain-containing protein. | Reticulon-like protein. | 0.797 |
atln-1 | spas-1 | Y54G2A.2a.1 | C24B5.2c.1 | GB1/RHD3-type G domain-containing protein. | Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily. | 0.966 |
atln-2 | T19C3.4 | Y41E3.3a.1 | T19C3.4.1 | GB1/RHD3-type G domain-containing protein. | Uncharacterized protein T19C3.4. | 0.571 |
atln-2 | spas-1 | Y41E3.3a.1 | C24B5.2c.1 | GB1/RHD3-type G domain-containing protein. | Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily. | 0.963 |
esyt-2 | T19C3.4 | T12A2.15a.1 | T19C3.4.1 | C2 domain-containing protein. | Uncharacterized protein T19C3.4. | 0.617 |
esyt-2 | lnp-1 | T12A2.15a.1 | C05E11.1b.1 | C2 domain-containing protein. | Endoplasmic reticulum junction formation protein lunapark-1; Plays a role in tubular endoplasmic reticulum network formation and maintenance (By similarity). May be involved in central nervous system development. Has a presynaptic role in neurotransmission. Likely to operate in synaptogenesis by regulating vesicular transport or localization. Required for correct localization of rab-3 and snb-1; Belongs to the lunapark family. | 0.423 |
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