STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chil-25Glyco_18 domain-containing protein. (483 aa)    
Predicted Functional Partners:
thn-1
THaumatiN family.
    
 
 0.819
fipr-23
FIP (Fungus-Induced Protein) Related.
      
 0.812
fipr-22
FIP (Fungus-Induced Protein) Related.
      
 0.810
cnc-7
CaeNaCin (Caenorhabditis bacteriocin).
      
 0.810
abf-2
Antibacterial factor-related peptide 2; Exhibits antimicrobial activity against the Gram-positive bacteria B.subtilis IFO 3134, K.varians MAFF 118076 and S.aureus ATCC 6538P, the Gram-negative bacteria A.tumefaciens MAFF 1001, B.bacteriovorus MAFF 106101 and K.pneumoniae MAFF 519002, and the yeasts C.krusei MAFF 114085, K.thermotolerans MAFF 113848 and T.delbrueckii MAFF 113811.
      
 0.697
oac-31
NRF domain-containing protein.
      
 0.697
trx-3
Thioredoxin domain-containing protein.
      
 0.692
cnc-4
CaeNaCin (Caenorhabditis bacteriocin).
      
 0.668
F01D5.5
Uncharacterized protein.
      
 0.667
irg-3
Infection Response protein.
      
 0.661
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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