STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bus-4Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. (368 aa)    
Predicted Functional Partners:
bus-12
JC8.12-like protein.
   
  
 0.963
bus-17
Hexosyltransferase.
   
 
 0.926
bus-2
Hexosyltransferase.
   
 
 0.925
srf-3
UDP-galactose/UDP-N-acetylglucosamine transporter srf-3; Acts as a transporter of both UDP-galactose and UDP-N- acetylglucosamine into the Golgi lumen.
   
  
 0.916
bus-8
Glycosyltransferase.
   
  
 0.873
gly-11
Putative polypeptide N-acetylgalactosaminyltransferase 11; May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.
   
  
 0.766
W03G11.3
Putative alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins; Belongs to the glycosyl hydrolase 29 family.
      
 0.747
osm-8
Osmotic avoidance abnormal protein 8; Negative regulator of the osmotic stress response. Acts via the transmembrane protein ptr-23.
   
  
 0.736
bah-1
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
   
  
 0.715
let-653
Protein let-653; Required for epithelial tube development and shaping. Involved in the morphogenesis and function of the three unicellular tubes of the excretory system, the canal cell, the duct cell and the pore cell. Also plays a role in cuticle development, alae formation and shaping of the vulval lumen. Required for larval development.
   
  
 0.701
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.