STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nyn-1RNase_Zc3h12a_2 domain-containing protein. (500 aa)    
Predicted Functional Partners:
rde-8
RNase_Zc3h12a domain-containing protein.
   
  
 0.896
mut-16
MUTator.
   
 
 0.858
mut-15
MUTator.
   
  
 0.821
smut-1
Synthetic MUTator.
   
  
 0.812
mut-14
MUTator; Belongs to the DEAD box helicase family.
   
  
 0.767
C33G3.6
Uncharacterized protein.
      
 0.740
hpo-40
Uncharacterized protein.
   
  
 0.713
F37C4.5
Protein F37C4.5.
      
 0.697
mut-2
NTP_transf_2 domain-containing protein.
   
  
 0.687
rde-2
Uncharacterized protein.
   
  
 0.672
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.