STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srbc-67Serpentine Receptor, class BC (Class B-like). (282 aa)    
Predicted Functional Partners:
srj-50
Serpentine Receptor, class J.
   
    0.584
F54E2.5
Uncharacterized protein.
   
    0.573
srh-76
Serpentine Receptor, class H.
   
    0.572
str-141
Seven TM Receptor.
   
    0.571
D2023.3
C2 domain-containing protein.
   
    0.570
srj-21
Serpentine Receptor, class J.
   
    0.569
srsx-21
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.569
str-134
Seven TM Receptor.
   
    0.565
str-116
Seven TM Receptor.
   
    0.565
srd-45
Serpentine receptor class delta-45.
   
    0.565
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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