STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugt-54UDP-GlucuronosylTransferase. (527 aa)    
Predicted Functional Partners:
nspe-7
Nematode Specific Peptide family, group E.
   
  
 0.702
nspb-10
Nematode Specific Peptide family, group B.
      
 0.694
zipt-2.3
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
      
 0.666
B0454.6
AA_permease_C domain-containing protein.
      
 0.617
C23H4.6
AAA_23 domain-containing protein.
      
 0.617
C35A5.3
MFS domain-containing protein.
      
 0.616
gst-27
Glutathione S-Transferase.
      
 0.616
nspe-5
Nematode Specific Peptide family, group E.
      
 0.589
nspe-1
Nematode Specific Peptide family, group E.
      
 0.584
col-91
Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity).
      
 0.581
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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