Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0454.6 | C23H4.6 | B0454.6.1 | C23H4.6a.1 | AA_permease_C domain-containing protein. | AAA_23 domain-containing protein. | 0.693 |
B0454.6 | C35A5.3 | B0454.6.1 | C35A5.3.1 | AA_permease_C domain-containing protein. | MFS domain-containing protein. | 0.692 |
B0454.6 | gst-27 | B0454.6.1 | Y53F4B.30.1 | AA_permease_C domain-containing protein. | Glutathione S-Transferase. | 0.698 |
B0454.6 | ugt-54 | B0454.6.1 | T25B9.7.2 | AA_permease_C domain-containing protein. | UDP-GlucuronosylTransferase. | 0.617 |
C23H4.6 | B0454.6 | C23H4.6a.1 | B0454.6.1 | AAA_23 domain-containing protein. | AA_permease_C domain-containing protein. | 0.693 |
C23H4.6 | C35A5.3 | C23H4.6a.1 | C35A5.3.1 | AAA_23 domain-containing protein. | MFS domain-containing protein. | 0.692 |
C23H4.6 | gst-27 | C23H4.6a.1 | Y53F4B.30.1 | AAA_23 domain-containing protein. | Glutathione S-Transferase. | 0.692 |
C23H4.6 | ugt-54 | C23H4.6a.1 | T25B9.7.2 | AAA_23 domain-containing protein. | UDP-GlucuronosylTransferase. | 0.617 |
C35A5.3 | B0454.6 | C35A5.3.1 | B0454.6.1 | MFS domain-containing protein. | AA_permease_C domain-containing protein. | 0.692 |
C35A5.3 | C23H4.6 | C35A5.3.1 | C23H4.6a.1 | MFS domain-containing protein. | AAA_23 domain-containing protein. | 0.692 |
C35A5.3 | gst-27 | C35A5.3.1 | Y53F4B.30.1 | MFS domain-containing protein. | Glutathione S-Transferase. | 0.717 |
C35A5.3 | ugt-54 | C35A5.3.1 | T25B9.7.2 | MFS domain-containing protein. | UDP-GlucuronosylTransferase. | 0.616 |
col-91 | nspb-10 | F09G8.6.1 | C01G12.6.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nematode Specific Peptide family, group B. | 0.736 |
col-91 | nspe-1 | F09G8.6.1 | Y38E10A.13.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nematode Specific Peptide family, group E. | 0.467 |
col-91 | nspe-5 | F09G8.6.1 | Y38E10A.16.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nematode Specific Peptide family, group E. | 0.660 |
col-91 | nspe-7 | F09G8.6.1 | Y38E10A.15.1 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Nematode Specific Peptide family, group E. | 0.698 |
col-91 | ugt-54 | F09G8.6.1 | T25B9.7.2 | Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | UDP-GlucuronosylTransferase. | 0.581 |
gst-27 | B0454.6 | Y53F4B.30.1 | B0454.6.1 | Glutathione S-Transferase. | AA_permease_C domain-containing protein. | 0.698 |
gst-27 | C23H4.6 | Y53F4B.30.1 | C23H4.6a.1 | Glutathione S-Transferase. | AAA_23 domain-containing protein. | 0.692 |
gst-27 | C35A5.3 | Y53F4B.30.1 | C35A5.3.1 | Glutathione S-Transferase. | MFS domain-containing protein. | 0.717 |
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