STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spp-9Saposin B-type domain-containing protein. (103 aa)    
Predicted Functional Partners:
spp-12
Saposin B-type domain-containing protein.
   
  
 0.854
T10H10.2
Sulfhydryl oxidase.
      
 0.763
spp-16
Saposin B-type domain-containing protein.
      
 0.758
F10A3.1
Uncharacterized protein.
      
 0.740
spp-7
SaPosin-like Protein family.
      
 0.699
col-178
Col_cuticle_N domain-containing protein.
   
  
 0.694
spp-10
SaPosin-like Protein family.
      
 0.691
dhs-18
DeHydrogenases, Short chain.
   
  
 0.666
npp-18
Nucleoporin SEH1; Probable component of the nuclear pore complex (NPC) which is involved in the trafficking of macromolecules between the cytoplasm and nucleus.
      
 0.664
clec-190
C-type LECtin.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.