mrpl-28 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

mrpl-28

Mitochondrial Ribosomal Protein, Large. (310 aa)

Predicted Functional Partners:

mrpl-4

0.958

mrps-26

0.952

mrps-18A

0.937

K07A1.10

0.931

mrps-18C

0.930

mrpl-16

0.930

mrpl-12

0.924

mrpl-41

0.920

mrpl-47

0.919

mrpl-11

0.919

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K07A1.10	mrpl-11	K07A1.10.2	B0303.15.1	Uncharacterized protein.	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	0.955
K07A1.10	mrpl-12	K07A1.10.2	W09D10.3.1	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Large.	0.904
K07A1.10	mrpl-16	K07A1.10.2	T04A8.11.1	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.930
K07A1.10	mrpl-28	K07A1.10.2	T25D3.2.2	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Large.	0.931
K07A1.10	mrpl-4	K07A1.10.2	T23B12.2.1	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Large.	0.927
K07A1.10	mrpl-41	K07A1.10.2	B0432.3.1	Uncharacterized protein.	39S ribosomal protein L41, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL41 family.	0.938
K07A1.10	mrpl-47	K07A1.10.2	B0261.4a.1	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Large.	0.903
K07A1.10	mrps-18A	K07A1.10.2	ZC262.8.1	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Small.	0.889
K07A1.10	mrps-18C	K07A1.10.2	C26E6.6.1	Uncharacterized protein.	Putative 39S ribosomal protein L3, mitochondrial.	0.887
K07A1.10	mrps-26	K07A1.10.2	C34E10.11.1	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Small.	0.921
mrpl-11	K07A1.10	B0303.15.1	K07A1.10.2	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Uncharacterized protein.	0.955
mrpl-11	mrpl-12	B0303.15.1	W09D10.3.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial Ribosomal Protein, Large.	0.995
mrpl-11	mrpl-16	B0303.15.1	T04A8.11.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Ribosomal_L16 domain-containing protein.	0.996
mrpl-11	mrpl-28	B0303.15.1	T25D3.2.2	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial Ribosomal Protein, Large.	0.919
mrpl-11	mrpl-4	B0303.15.1	T23B12.2.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial Ribosomal Protein, Large.	0.997
mrpl-11	mrpl-41	B0303.15.1	B0432.3.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	39S ribosomal protein L41, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL41 family.	0.982
mrpl-11	mrpl-47	B0303.15.1	B0261.4a.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial Ribosomal Protein, Large.	0.992
mrpl-11	mrps-18A	B0303.15.1	ZC262.8.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial Ribosomal Protein, Small.	0.913
mrpl-11	mrps-18C	B0303.15.1	C26E6.6.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Putative 39S ribosomal protein L3, mitochondrial.	0.998
mrpl-11	mrps-26	B0303.15.1	C34E10.11.1	Probable 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	Mitochondrial Ribosomal Protein, Small.	0.813