STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T25D3.4MFS domain-containing protein. (550 aa)    
Predicted Functional Partners:
nstp-4
Nucleotide Sugar TransPorter family.
 
 
  
 0.839
nstp-5
Nucleotide Sugar TransPorter family.
 
 
  
 0.675
W09D10.1
Arf-GAP domain-containing protein.
      
 0.581
svop-1
Putative transporter svop-1.
   
  
 0.494
mfsd-6
MFS_1_like domain-containing protein.
      
 0.477
nstp-3
Nucleotide Sugar TransPorter family.
 
    
 0.453
F10D7.2
MFS domain-containing protein.
  
  
0.432
kin-3
Casein kinase II subunit alpha; Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. May participate in Wnt signaling. Modulates two aspects of male mating behavior; response to hermaphrodite contact and vulval location, acting in the same pathway as lov-1 and pkd-2.
      
 0.420
F16H11.1
Uncharacterized protein.
      
 0.405
samt-1
SAM (S-Adenosyl Methionine) Transporter.
      
 0.402
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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