STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T28A8.3Uncharacterized protein. (621 aa)    
Predicted Functional Partners:
T28A8.4
Uncharacterized protein.
   
   
0.592
T28A8.6
Uncharacterized protein.
   
   
0.591
fubl-4
FUBp (FUBP) Like.
   
    0.581
Y42H9B.3
Uncharacterized protein.
   
    0.540
C42C1.8
Uncharacterized protein.
   
    0.538
Y14H12B.2
SPK domain-containing protein.
   
   
0.538
Y47G6A.25
Uncharacterized protein.
   
    0.537
inx-22
Innexin; Structural component of the gap junctions. Belongs to the pannexin family.
   
    0.528
mans-4
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
    0.468
syp-1
Synaptonemal complex protein SYP-1.
   
    0.453
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.