Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F09B12.3 | T08H10.1 | F09B12.3.1 | T08H10.1.1 | Putative phospholipase B-like 2; Putative phospholipase; Belongs to the phospholipase B-like family. | Aldo_ket_red domain-containing protein. | 0.414 |
| F09B12.3 | npa-1 | F09B12.3.1 | VC5.3a.1 | Putative phospholipase B-like 2; Putative phospholipase; Belongs to the phospholipase B-like family. | Nematode Polyprotein Allergen related. | 0.460 |
| R07E5.1 | T08G11.1 | R07E5.1.1 | T08G11.1a.1 | G patch domain-containing protein 1 homolog. | Uncharacterized protein. | 0.540 |
| R07E5.1 | npa-1 | R07E5.1.1 | VC5.3a.1 | G patch domain-containing protein 1 homolog. | Nematode Polyprotein Allergen related. | 0.660 |
| R07E5.1 | ttc-17 | R07E5.1.1 | T19A5.1.1 | G patch domain-containing protein 1 homolog. | TeTratriCopeptide repeat domain protein related. | 0.705 |
| T08G11.1 | R07E5.1 | T08G11.1a.1 | R07E5.1.1 | Uncharacterized protein. | G patch domain-containing protein 1 homolog. | 0.540 |
| T08G11.1 | emb-5 | T08G11.1a.1 | T04A8.14.1 | Uncharacterized protein. | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | 0.704 |
| T08G11.1 | hoe-1 | T08G11.1a.1 | E04A4.4a.1 | Uncharacterized protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (By similarity). Involved in germline proliferation. May be required for both mitosis and meiosis in germ cells. | 0.615 |
| T08G11.1 | npa-1 | T08G11.1a.1 | VC5.3a.1 | Uncharacterized protein. | Nematode Polyprotein Allergen related. | 0.816 |
| T08G11.1 | pbrm-1 | T08G11.1a.1 | C26C6.1a.1 | Uncharacterized protein. | HMG box domain-containing protein. | 0.512 |
| T08G11.1 | rfp-1 | T08G11.1a.1 | R05D3.4b.1 | Uncharacterized protein. | E3 ubiquitin-protein ligase bre-1; E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. Belongs to the BRE1 family. | 0.624 |
| T08G11.1 | ttc-17 | T08G11.1a.1 | T19A5.1.1 | Uncharacterized protein. | TeTratriCopeptide repeat domain protein related. | 0.886 |
| T08G11.1 | ubr-1 | T08G11.1a.1 | C32E8.11.1 | Uncharacterized protein. | E3 ubiquitin-protein ligase ubr-1; E3 ubiquitin-protein ligase which is a component of the N-end rule pathway (By similarity). Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N- end rule, leading to their ubiquitination and subsequent degradation (By similarity). In complex with ced-3, required for the ced-3-mediated cleavage and subsequent degradation of the heterochronic protein lin-28 to regulate seam cell fate patterning during larval development. Negatively regulates glutamate metabolism through the aspartate aminotrans [...] | 0.643 |
| T08H10.1 | F09B12.3 | T08H10.1.1 | F09B12.3.1 | Aldo_ket_red domain-containing protein. | Putative phospholipase B-like 2; Putative phospholipase; Belongs to the phospholipase B-like family. | 0.414 |
| T08H10.1 | npa-1 | T08H10.1.1 | VC5.3a.1 | Aldo_ket_red domain-containing protein. | Nematode Polyprotein Allergen related. | 0.471 |
| emb-5 | T08G11.1 | T04A8.14.1 | T08G11.1a.1 | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | Uncharacterized protein. | 0.704 |
| emb-5 | hoe-1 | T04A8.14.1 | E04A4.4a.1 | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (By similarity). Involved in germline proliferation. May be required for both mitosis and meiosis in germ cells. | 0.457 |
| emb-5 | npa-1 | T04A8.14.1 | VC5.3a.1 | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | Nematode Polyprotein Allergen related. | 0.691 |
| emb-5 | pbrm-1 | T04A8.14.1 | C26C6.1a.1 | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | HMG box domain-containing protein. | 0.739 |
| emb-5 | rfp-1 | T04A8.14.1 | R05D3.4b.1 | Suppressor of Ty 6 homolog; May regulate transcriptional elongation by RNA polymerase II. Required for several aspects of morphogenesis of C.elegans, including regulation of division in the germline and gut and specification of ventral-uterine precursor cell fate; Belongs to the SPT6 family. | E3 ubiquitin-protein ligase bre-1; E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. Belongs to the BRE1 family. | 0.754 |
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