STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paf-11-alkyl-2-acetylglycerophosphocholine esterase. (384 aa)    
Predicted Functional Partners:
lis-1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as nuclear migration during cell division. Part of a complex with nud-2, which is recruited to the nuclear envelope by unc-83, where, in turn, it recruits dynein to the nuclear surface and regulates nuclear migration in hypodermal precursor cells. Plays a role in GABAergic synaptic vesicle localization in [...]
     
 0.918
ipla-2
Intracelllar PhosphoLipase A family.
     
 0.909
ipla-3
Intracelllar PhosphoLipase A family.
     
 0.909
C03H5.4
Phospholipase A(2).
     
 0.908
C07E3.9
Phospholipase A(2).
     
 0.908
paf-2
Platelet-activating factor acetylhydrolase homolog 2; Belongs to the AB hydrolase superfamily. Lipase family.
  
  
 
0.901
C34F11.1
RING-type domain-containing protein.
   
    0.592
C01G10.1
Uncharacterized protein.
   
    0.584
clp-8
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
    0.568
Y48G1C.5
Uncharacterized protein.
   
   0.547
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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