Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| W04A8.1 | aspm-1 | W04A8.1a.1 | C45G3.1.1 | Uncharacterized protein. | Calponin-homology (CH) domain-containing protein. | 0.734 |
| W04A8.1 | cdc-7 | W04A8.1a.1 | C34G6.5.1 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.731 |
| W04A8.1 | chk-1 | W04A8.1a.1 | Y39H10A.7a.1 | Uncharacterized protein. | Serine/threonine-protein kinase chk-1; Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest and activation of DNA repair in response to the presence of DNA damage or unreplicated DNA. May also negatively regulate cell cycle progression during unperturbed cell cycles. Required for checkpoint mediated cell cycle arrest in response to DNA damage in germline cells. Delays cell-cycle reentry of the Z2 and Z3 primordial germ cells in response to transcription-induced DNA damage as they emerge from cell cycle arrest in L1 larvae. Essential for embryogene [...] | 0.593 |
| W04A8.1 | clsp-1 | W04A8.1a.1 | F25H5.5a.1 | Uncharacterized protein. | CLaSPin homolog. | 0.891 |
| W04A8.1 | hcp-6 | W04A8.1a.1 | Y110A7A.1b.1 | Uncharacterized protein. | Condensin-2 complex subunit. | 0.596 |
| W04A8.1 | hpr-17 | W04A8.1a.1 | F32A11.2.2 | Uncharacterized protein. | Homolog of S. Pombe Rad. | 0.581 |
| W04A8.1 | lpd-7 | W04A8.1a.1 | R13A5.12.1 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.565 |
| W04A8.1 | mre-11 | W04A8.1a.1 | ZC302.1.2 | Uncharacterized protein. | Double-strand break repair protein mre-11; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. In response to ionizing radiation, probably required for the association between the brc-1-brd-1 heterodimer and rad-51 and let-70 in order to activate E3-ubiquitin ligase activity of the heterodimer and induce ubiquitination at DNA damage sites. Belongs to the MRE11/RAD32 family. | 0.627 |
| W04A8.1 | mus-101 | W04A8.1a.1 | F37D6.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.858 |
| W04A8.1 | psf-3 | W04A8.1a.1 | Y65B4BR.8.1 | Uncharacterized protein. | Sld5 domain-containing protein. | 0.791 |
| aspm-1 | W04A8.1 | C45G3.1.1 | W04A8.1a.1 | Calponin-homology (CH) domain-containing protein. | Uncharacterized protein. | 0.734 |
| aspm-1 | chk-1 | C45G3.1.1 | Y39H10A.7a.1 | Calponin-homology (CH) domain-containing protein. | Serine/threonine-protein kinase chk-1; Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest and activation of DNA repair in response to the presence of DNA damage or unreplicated DNA. May also negatively regulate cell cycle progression during unperturbed cell cycles. Required for checkpoint mediated cell cycle arrest in response to DNA damage in germline cells. Delays cell-cycle reentry of the Z2 and Z3 primordial germ cells in response to transcription-induced DNA damage as they emerge from cell cycle arrest in L1 larvae. Essential for embryogene [...] | 0.484 |
| aspm-1 | clsp-1 | C45G3.1.1 | F25H5.5a.1 | Calponin-homology (CH) domain-containing protein. | CLaSPin homolog. | 0.653 |
| aspm-1 | hcp-6 | C45G3.1.1 | Y110A7A.1b.1 | Calponin-homology (CH) domain-containing protein. | Condensin-2 complex subunit. | 0.613 |
| cdc-7 | W04A8.1 | C34G6.5.1 | W04A8.1a.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.731 |
| cdc-7 | chk-1 | C34G6.5.1 | Y39H10A.7a.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Serine/threonine-protein kinase chk-1; Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest and activation of DNA repair in response to the presence of DNA damage or unreplicated DNA. May also negatively regulate cell cycle progression during unperturbed cell cycles. Required for checkpoint mediated cell cycle arrest in response to DNA damage in germline cells. Delays cell-cycle reentry of the Z2 and Z3 primordial germ cells in response to transcription-induced DNA damage as they emerge from cell cycle arrest in L1 larvae. Essential for embryogene [...] | 0.696 |
| cdc-7 | clsp-1 | C34G6.5.1 | F25H5.5a.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | CLaSPin homolog. | 0.669 |
| cdc-7 | hpr-17 | C34G6.5.1 | F32A11.2.2 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Homolog of S. Pombe Rad. | 0.545 |
| cdc-7 | lpd-7 | C34G6.5.1 | R13A5.12.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.665 |
| cdc-7 | mus-101 | C34G6.5.1 | F37D6.1.1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.852 |
page 1 of 4